pro-iBiosphere - Results

A decadal view of biodiversity informatics: challenges and priorities

Authors: Hardisty A., Roberts D.

URL/DOI: http://www.biomedcentral.com/1472-6785/13/16/abstract

TYPE: Journal paper

| STATUS: Published

YEAR: 2013

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(0.25 MB)

JOURNAL: BMC Ecology

VOLUME/ISSUE: 13(16)

PUBLISHER: BioMed Central

pro-iBiosphere DERIVED: YES

UPLOADED ON: 18.04.2013 BY: Iliyana Kuzmova

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A Framework of Scientific-Cloud for iFlora

URL/DOI: http://journal.kib.ac.cn/EN/abstract/abstract3107.shtml

TYPE: Journal paper

| STATUS: Published

YEAR: 2012

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(1.44 MB)

JOURNAL: Plant Diversity and Resources

VOLUME/ISSUE: 34(6)

pro-iBiosphere DERIVED: NO

UPLOADED ON: 16.12.2012 BY: Iliyana Kuzmova

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An appraisal of megascience platforms for biodiversity information

Authors: Dagmar Triebel, Gregor Hagedorn, Gerhard Rambold

URL/DOI: http://www.pensoft.net/journals/mycokeys/article/4302/abstract/an-appraisal-of-megascience-platforms-for

TYPE: Journal paper

| STATUS: Published

YEAR: 2012

JOURNAL: MycoKeys

VOLUME/ISSUE: 5 (2012)

pro-iBiosphere DERIVED: YES

UPLOADED ON: 23.01.2013 BY: Gregor Hagedorn

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Biodiversity research in the “big data” era: GigaScience and Pensoft work together to publish the most data-rich species description.

Authors: Edmunds, Scott C., Chris I. Hunter, Vincent Smith, Pavel Stoev, and Lyubomir Penev

URL/DOI: http://www.gigasciencejournal.com/content/2/1/14

TYPE: Journal paper

| STATUS: Published

YEAR: 2013

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(0.15 MB)

JOURNAL: GigaScience

VOLUME/ISSUE: 2

pro-iBiosphere DERIVED: YES

UPLOADED ON: 04.11.2013 BY: Iliyana Kuzmova

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Bouchout Declaration

Report to the RDA 4th Penary Persistent Object Identifier IG, Amsterdam, September 24, 2014

Authors: Agosti, D.

TYPE: Proceedings paper

| STATUS: Other

YEAR: 2014

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(1.30 MB)

pro-iBiosphere DERIVED: YES

UPLOADED ON: 25.09.2014 BY: Donat Agosti

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Comment

D1.2.2 Management report 2

Authors: Naturalis

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(0.92 MB)

DUEDATE: February 2013

DELIVERABLE NUMBER: D1.2.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.03.2013 BY: Stephanie Morales

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Comment

D1.2.3 Management report 3

Authors: Naturalis

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(0.86 MB)

DUEDATE: May 2013

DELIVERABLE NUMBER: D1.2.3

pro-iBiosphere DERIVED: NO

UPLOADED ON: 05.06.2013 BY: Iliyana Kuzmova

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Comment

D1.2.4 Management report 4

Authors: Naturalis

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(0.61 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D1.2.4

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.09.2013 BY: Iliyana Kuzmova

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Comment

D1.2 Management report 1

Authors: Naturalis

TYPE: Deliverable

| STATUS: Published

YEAR: 2012

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(0.35 MB)

DUEDATE: November 2012

DELIVERABLE NUMBER: D1.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.12.2012 BY: Pavel Stoev

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D2.1.1 Report on ongoing biodiversity related projects, current e-infrastructures and standards

Authors: D. Agosti, L. Penev, T. Catapano, S. Eckert, T. Georgiev, Q. Groom, A. Güntsch, G. Hagedorn, P. Hovenkamp, D. Kirkup, E. Kralt, D. Mietchen, J. Miller, S. Sierra

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(2.83 MB)

DUEDATE: June 2013

DELIVERABLE NUMBER: D2.1.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.07.2013 BY: Eva Kralt

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Comment

D2.1.2 Towards a draft strategy for increased cooperation

Authors: D. Agosti, D. Patterson, G. Hagedorn; T. Catapano, Q. Groom, A. Güntsch, D. Kirkup, E. Kralt, D. Mietchen, R. Morris, A. Paton, L. Penev, S. Sierra

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(0.97 MB)

DUEDATE: September 2013

DELIVERABLE NUMBER: D2.1.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.10.2013 BY: Iliyana Kuzmova

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Comment

D2.2 Report on user feedback

Authors: RBGK

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(1.72 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D2.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 02.09.2013 BY: Iliyana Kuzmova

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D2.3 The Use of e-Tools among Producers of Taxonomic Knowledge (Proof of concept report on the use of e-tools)

Authors: NBGB

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(1.01 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D2.3

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.09.2013 BY: Iliyana Kuzmova

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D2.4.1 Draft policy on Open Access for data and information (1)

Authors: Plazi

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(1.22 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D2.4.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.09.2013 BY: Iliyana Kuzmova

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Comment

D2.4.2 Draft policy on Open Access for data and information

Authors: W. Egloff, D. Agosti, R. A. Morris, Q. Groom, A. Güntsch, P. Hovenkamp, J.-W. Mantel, S. Sierra, D. Mietchen, A. Paton, D. Patterson, P. Stoev, J. Macklin

TYPE: Deliverable

| STATUS: Published

YEAR: 2014

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(0.81 MB)

DUEDATE: July

DELIVERABLE NUMBER: D2.4.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 03.09.2014 BY: Donat Agosti

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Comment

D.3.1 Towards a set of Best Practices on Editorial Policies for the curation and publication of fundamental biodiversity data and information in an e-environment

Authors: Naturalis

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(1.41 MB)

DUEDATE: May 2013

DELIVERABLE NUMBER: D.3.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 05.06.2013 BY: Iliyana Kuzmova

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D3.2.1 Concept paper for involvement of individual experts, commercial vendors, and citizen scientists

Authors: Plazi, Naturalis, BGBM, Pensoft, NBGB

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(0.82 MB)

DUEDATE: May 2013

DELIVERABLE NUMBER: D3.2.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 05.06.2013 BY: Iliyana Kuzmova

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Comment

D3.2.2 Report on the state and quality of biosystematics documents and survey reports

Authors: Plazi

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(0.64 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D3.2.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.09.2013 BY: Iliyana Kuzmova

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Comment

D3.3.2. Report on progress during the coordination process of partners and non consortium partners (regarding interoperability of markup approaches for literature)

Authors: Mietchen, D.

TYPE: Deliverable

| STATUS: Published

YEAR: 2014

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(1.09 MB)

DUEDATE: April

DELIVERABLE NUMBER: D3.3.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 12.09.2014 BY: Donat Agosti

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Comment

D.4.2 Strategy for improvement & interoperability of the XML schemas

Authors: Plazi, Pensof, BGBM, NBGB, RBGK

URL/DOI: http://wiki.pro-ibiosphere.eu/w/media/c/c6/Pro-iBiosphere_WP4_Plazi_D4_2_VFF31_01_2014.pdf

TYPE: Deliverable

| STATUS: Published

YEAR: 2014

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(1.04 MB)

DUEDATE: January

DELIVERABLE NUMBER: D4.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 13.09.2014 BY: Donat Agosti

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Comment

D5.1.1 Web-based platform and Wiki

Authors: Pensoft

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(2.28 MB)

DUEDATE: December 2012

DELIVERABLE NUMBER: D5.1.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 15.03.2013 BY: Iliyana Kuzmova

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Comment

D5.2.1.3 Electronic newsletter 3

Authors: Pensoft

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

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(0.47 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D5.2.1.3

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.09.2013 BY: Iliyana Kuzmova

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Comment

D5.2.1 Report on dissemination, communication and public awareness

Authors: Sigma

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(22.30 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D5.2.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 02.09.2013 BY: Iliyana Kuzmova

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Comment

D6.3.1 Report on diversity and strengths of existing business plans and discussion of sustainability

Updated on a six months basis

Authors: Sigma Orionis

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(2.69 MB)

DUEDATE: February 2013

DELIVERABLE NUMBER: D6.3.1

pro-iBiosphere DERIVED: NO

UPLOADED ON: 04.03.2013 BY: Stephanie Morales

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Comment

D6.3.2 Report on diversity and strengths of existing business models and discussion of sustainability

Authors: Sigma

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(5.77 MB)

DUEDATE: August 2013

DELIVERABLE NUMBER: D6.3.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 02.09.2013 BY: Iliyana Kuzmova

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Comment

Electronic Newsletter 6

Authors: Pensoft

TYPE: Deliverable

| STATUS: Published

YEAR: 2014

DOWNLOAD:

(1.90 MB)

DUEDATE: Aug 2014

DELIVERABLE NUMBER: D5.2.1.6

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.09.2014 BY: Pro- iBiosphere

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Comment

Enriched biodiversity data as a resource and service

Authors: Vos R, Biserkov J, Balech B, Beard N, Blissett M, Brenninkmeijer C et al.

URL/DOI: http://dx.doi.org/10.3897/BDJ.2.e1125

TYPE: Journal paper

| STATUS: Published

YEAR: 2014

JOURNAL: Biodiversity Data Journal

VOLUME/ISSUE: 2

PUBLISHER: PenSoft

pro-iBiosphere DERIVED: YES

UPLOADED ON: 16.06.2014 BY: Pro- iBiosphere

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Eupolybothrus cavernicolus Komerički & Stoev sp. n. (Chilopoda: Lithobiomorpha: Lithobiidae): the first eukaryotic species description combining transcriptomic, DNA barcoding and micro-CT imaging data

Authors: Stoev P, Komerički A, Akkari N, Liu S, Zhou X, Weigand A, Hostens J, Hunter C, Edmunds S, Porco D, Zapparoli M, Georgiev T, Mietchen D, Roberts D, Faulwetter S, Smith V, Penev L

URL/DOI: 10.3897/BDJ.1.e1013

TYPE: Journal paper

| STATUS: Published

YEAR: 2013

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(1.76 MB)

JOURNAL: Biodiversity Data Journal

VOLUME/ISSUE: 1

pro-iBiosphere DERIVED: YES

UPLOADED ON: 04.11.2013 BY: Iliyana Kuzmova

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Comment

Final Conference Event Report

Authors: Stephanie Morales

TYPE: Proceedings paper

| STATUS: Published

YEAR: 2014

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(0.40 MB)

DUEDATE: June 2014

pro-iBiosphere DERIVED: YES

UPLOADED ON: 26.06.2014 BY: Stephanie Morales

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Comment

Identifying Audiences of E-Infrastructures - Tools for Measuring Impact

URL/DOI: http://dx.doi.org/10.1371/journal.pone.0050943

TYPE: Journal paper

| STATUS: Published

YEAR: 2012

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(0.29 MB)

JOURNAL: PLoS ONE

VOLUME/ISSUE: 7(12)

pro-iBiosphere DERIVED: NO

UPLOADED ON: 16.12.2012 BY: Iliyana Kuzmova

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Comment

Implementation of TaxPub, an NLM DTD extension for domain-specific markup in taxonomy, from the experience of a biodiversity publisher

URL/DOI: http://www.ncbi.nlm.nih.gov/books/NBK100351/

TYPE: Proceedings paper

| STATUS: Published

pro-iBiosphere DERIVED: YES

UPLOADED ON: 30.10.2012 BY: Pavel Stoev

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Comment

Open exchange of scientific knowledge and European copyright: The case of biodiversity information

Authors: Egloff W, Patterson DJ, Agosti D, Hagedorn G

URL/DOI: http://www.pensoft.net/journals/zookeys/article/7717/open-exchange-of-scientific-knowledge-and-european-copyright-the-case-of-biodiversity-information

TYPE: Journal paper

| STATUS: Published

YEAR: 2014

DOWNLOAD:

(0.20 MB)

JOURNAL: ZooKeys

VOLUME/ISSUE: 414

PUBLISHER: Pensoft Publishers

pro-iBiosphere DERIVED: YES

UPLOADED ON: 09.06.2014 BY: Margarita Grudova

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Comment

Open exchange of scientific knowledge and European copyright: The case of biodiversity information

Authors: Willi Egloff, David J. Patterson, Donat Agosti, Gregor Hagedorn

URL/DOI: http://dx.doi.org/10.3897/zookeys.414.7717

TYPE: Journal paper

| STATUS: Published

YEAR: 2014

DOWNLOAD:

(0.20 MB)

JOURNAL: ZooKeys

VOLUME/ISSUE: 414

PUBLISHER: PenSoft

pro-iBiosphere DERIVED: YES

UPLOADED ON: 09.06.2014 BY: Pro- iBiosphere

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Comment

pro-iBiosphere project periodic report

Authors: pro-iBiosphere consortium

TYPE: Deliverable

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(2.20 MB)

DUEDATE: 31 October 2013

pro-iBiosphere DERIVED: NO

UPLOADED ON: 01.11.2013 BY: Iliyana Kuzmova

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Comment

Report on dissemination, communication and public awareness

Authors: Camille Torrenti (Sigma Orionis)

TYPE: Deliverable

| STATUS: Published

YEAR: 2014

DOWNLOAD:

(1.04 MB)

DUEDATE: August 2014

DELIVERABLE NUMBER: D522

pro-iBiosphere DERIVED: NO

UPLOADED ON: 27.08.2014 BY: Camille Torrenti

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Comment

Report on diversity and strengths of existing business plans and discussion of sustainability (3)

Authors: SIgma Orionis, Royal Botanic Gardens Kew

TYPE: Deliverable

| STATUS: Published

YEAR: 2014

DOWNLOAD:

(2.76 MB)

DUEDATE: February 2014

DELIVERABLE NUMBER: D6.3.3

pro-iBiosphere DERIVED: NO

UPLOADED ON: 20.05.2014 BY: Stephanie Morales

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Comment

Scientific names of organisms: attribution, rights, and licensing

Authors: Patterson, D. Egloff, W. Agosti, D. Eades, D. Franz, N. Hagedorn, G. Rees, J.A. Remsen, D.R.

URL/DOI: http://www.biomedcentral.com/1756-0500/7/79

TYPE: Journal paper

| STATUS: Published

YEAR: 2014

DOWNLOAD:

(0.20 MB)

JOURNAL: BMC Research Notes

VOLUME/ISSUE: 7:79

DUEDATE: July

DELIVERABLE NUMBER: D.2.4.2

pro-iBiosphere DERIVED: NO

UPLOADED ON: 03.09.2014 BY: Donat Agosti

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Comment

Some thoughts after the Cusco meeting

Authors: Agosti, D.

URL/DOI: 10.5281/zenodo.11671

TYPE: Journal paper

| STATUS: Published

YEAR: 2014

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(8.71 MB)

JOURNAL: Hamuli

VOLUME/ISSUE: 5/2)

PUBLISHER: International Society of Hymenopterists

pro-iBiosphere DERIVED: NO

UPLOADED ON: 11.09.2014 BY: Donat Agosti

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Comment

The Future of Botanical Monography: Report from an international workshop, 12–16 March 2012, Smolenice, Slovak Republic

Authors: Crespo A, Crisci JV, Dorr LJ, Ferencová Z, Frodin D, Geltman DV, Kilian N, Linder HP, Lohmann LG, Oberprieler C, Penev L et al.

TYPE: Journal paper

| STATUS: Published

YEAR: 2013

DOWNLOAD:

(0.64 MB)

JOURNAL: TAXON

VOLUME/ISSUE: 62(1)

pro-iBiosphere DERIVED: NO

UPLOADED ON: 21.02.2013 BY: Iliyana Kuzmova

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Comment

Tropical Plant Collecting: From the Field to the Internet

Authors: Mori S. A., Berkov A., Gracie C. A., Hecklau E. F.

URL/DOI: http://www.tropicalbio.org/index.php?option=com_content&view=article&id=553:tropical-plant-collecting-from-the-field-to-the-internet&catid=71&Itemid=110

TYPE: Book

| STATUS: Published

YEAR: 2011

PUBLISHER: the Association for Tropical Biology & Conservation

pro-iBiosphere DERIVED: NO

UPLOADED ON: 30.01.2013 BY: Iliyana Kuzmova

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